Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015904903.1_cds_XP_016455001.1_48971
CDS Infomation

[gene=LOC107779158] [db_xref=GeneID:107779158] [protein=transcription factor GAMYB-like isoform X2] [protein_id=XP_016455001.1] [location=complement(join(66564..67544,71147..71476))] [gbkey=CDS]
Sequence

ATGACTTCAAAAGTTGGCGTGGGTTCGCCATCTGTTGAAGAAGCTAGCGGTGGAGGAAAT
ACCAGAGGAGGTGTCCCACTGAAAAAAGGTCCTTGGACTAAAGAAGAAGACGCGGTTTTG
ATGGATTACATCAGAAAACATGGGGAAGGGAATTGGAGTGCCGTCCAGAAGCACTCAGGA
CTTGCTCGTTGTGGGAAAAGTTGCCGTTTGCGCTGGGCAAATCACCTAAGACCAGATTTA
AAGAAAGGTGCTTTAACTCCAGAGGAAGTGCGTCGCATAAATGAACTGCATGCTAAGATG
GGAAACAAATGGGCACAAATAGCTGCTAAGTTGCCAGGTCGCACAGATAATGAGATAAAG
AACTACTGGAATACCAGAATAAAGAAACAACGGCGTGTAGGCTTGCAAATATATCCTCCG
GATATTTGTTTCCAGGCATTTAGTGAGAACAAACAAAATAATGAGCTGGGAATTTTCTCC
TCTGCAAATTCACATCCTGATTTCTTGCCTATTAACGATTTTGAGATTCCAACTGTGGAA
TTCAAAAAATTGGAACCTAGTCAGCAGCTGTATCCTTGGGCACTTGTTAATATTGCTGCT
AGTAGCTTTTTTGATATTCCTGCAACTAGCCTGCTGGCTCAGGCTCTTAGTTCTTCTAAT
ACTTGTTCTGGCCTCTCAACAATGCATCCATCCAAGCGTATACGAGGATCAGAATCTTGG
TTCTTTGGTATGACTGATAATCTTTTTCAAGCTTGCCATCAATATCAAAATAATGGTTCT
TTGTTTGCTCAATCCTTGGGGTTTTCCTCGTCATATACACATAATCTGACATCTGATAAT
CACCCATCATTCTCCGGTGAAATTCCTGGCAGCCATGCCCCTTTAAATGGCAACTCTTCT
TCTTCAGAGCCCAAATGGGCTAAGAAGCTGGAGCTCCCTTCACTCCAAATTCAGATGGCA
AATTGGGGTTCACCTTCCCCACTTCCTTCACTTGAGTCCTTCGATACTTTGATTCAATAC
CCTCCAAATGAGCATGCTGATTCGGGCAGTCTGTCACCTCGGAACAGTGGTCTATTGGAC
GCTGTACTTTATGAATCACAAACATCCAAAGCTTCAAAGCATAATTCACATCAGGAGACT
TCTTGTGATGTAGTGGATGATTCATGTCCTGATCTCCAAGAGACACAGTGGGGAACTTAC
AGTAACCCAATCTCTCCTTTAGGACATTCTGCTGCATCAGTGTTGAGTGAATATACCCCT
ACGGAGGTTCATTGGATGAGCCCCCCAGTCAATAGCGATGGTGGCTGGTGA

Peptide Sequence

PEP ID

XP_016455001.1
PEP Infomation

PREDICTED: transcription factor GAMYB-like isoform X2 [Nicotiana tabacum]
Sequence

MTSKVGVGSPSVEEASGGGNTRGGVPLKKGPWTKEEDAVLMDYIRKHGEGNWSAVQKHSG
LARCGKSCRLRWANHLRPDLKKGALTPEEVRRINELHAKMGNKWAQIAAKLPGRTDNEIK
NYWNTRIKKQRRVGLQIYPPDICFQAFSENKQNNELGIFSSANSHPDFLPINDFEIPTVE
FKKLEPSQQLYPWALVNIAASSFFDIPATSLLAQALSSSNTCSGLSTMHPSKRIRGSESW
FFGMTDNLFQACHQYQNNGSLFAQSLGFSSSYTHNLTSDNHPSFSGEIPGSHAPLNGNSS
SSEPKWAKKLELPSLQIQMANWGSPSPLPSLESFDTLIQYPPNEHADSGSLSPRNSGLLD
AVLYESQTSKASKHNSHQETSCDVVDDSCPDLQETQWGTYSNPISPLGHSAASVLSEYTP
TEVHWMSPPVNSDGGW

Transcript Sequence

Gene sequence data has not been registered.